1O3U: Crystal structure of an hepn domain protein (tm0613 ...

2024-11-26

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1O3U ; R-Value Work · 0.179 ; R-Value Observed: 0.185 ; Mutation(s): 1 ; Gene Names · TM0613 ; UniProt. Find proteins for Q9WZ82 (Thermotoga maritima (strain ATCC ... WarningYouareusingawebbrowserthatwedonotsupport.Ourwebsitewillnotworkproperly.Pleaseupdatetoanewerversionordownloadanewwebbrowser,suchasChromeorFirefox.TogglenavigationRCSBPDBDeposit PrepareDataPDBx/mmCIFfilepdb_extractSF-ToolLigandExpoMAXITValidateDataValidationServerInformationforJournalsValidationTaskForcesDepositDatawwPDBOneDepSystemPDB-DevDepositionHelp&ResourcesDepositFAQTutorialsAnnotationPoliciesProcessingProceduresPDBx/mmCIFDictionaryChemicalComponentDictionaryPDBFormatGuideBioSyncBeamlines/FacilitiesRelatedToolsSearch BasicSearchAdvancedSearchSequenceSearchChemicalSketchToolUnreleased&NewEntriesBrowseAnnotationsPDBDataDistributionsPDBStatisticsLigandsDrugs&DrugTargetsVisualize Mol*3DViewerProteinFeatureViewGenomeViewAnalyze PairwiseStructureAlignmentProteinSymmetryStructureQualityMapGenomicPositiontoProteinPDBStatisticsEPPICBiologicalAssembliesPDBCitationMeSHNetworkExplorerIntegratedResourcesAdditionalResourcesDownload 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GeneralHelpSearchandBrowseBasicSearchAdvancedSearchMol*SequenceViewersToolsProgrammaticAccessAdditionalResourcesSoftwareSupportersDepositionResourcesFAQsGlossaryCareers188663BiologicalMacromolecularStructuresEnablingBreakthroughsinResearchandEducationNavigationTabsStructureSummary3DViewAnnotationsExperimentSequenceGenomeVersionsAsymmetricUnit&nbsp3DView:&nbspStructure|1D-3DView|ElectronDensity|ValidationReportBiologicalAssembly1&nbsp&nbsp3DView:&nbspStructure|1D-3DView|ElectronDensity|ValidationReportGlobalSymmetry:Cyclic-C2&nbsp&nbsp(3DView)GlobalStoichiometry:Homo2-mer-&nbspA2&nbspFindSimilarAssembliesBiologicalassembly1&nbspassignedbyauthors.PreviousNextMacromoleculeContentTotalStructureWeight:15.62kDa&nbspAtomCount:1096&nbspModelledResidueCount:120&nbspDepositedResidueCount:135&nbspUniqueproteinchains:1 DisplayFiles FASTASequencePDBFormatPDBFormat(Header)mmCIFFormatmmCIFFormat(Header) DownloadFiles FASTASequencePDBFormatPDBFormat(gz)PDBx/mmCIFFormatPDBx/mmCIFFormat(gz)PDBML/XMLFormat(gz)BiologicalAssembly1StructureFactors(CIF)StructureFactors(CIF-gz)ValidationFullPDFValidationXMLfo-fcMap(DSN6)2fo-fcMap(DSN6)MapCoefficients(MTZformat)1O3UCrystalstructureofanhepndomainprotein(tm0613)fromthermotogamaritimaat1.75AresolutionPDBDOI:&nbsp10.2210/pdb1O3U/pdbClassification:&nbspUNKNOWNFUNCTIONOrganism(s):&nbspThermotogamaritimaExpressionSystem:&nbspEscherichiacoliMutation(s):&nbspYes&nbspDeposited:&nbsp2003-03-28&nbspReleased:&nbsp2003-04-22&nbspDepositionAuthor(s):&nbspJointCenterforStructuralGenomics(JCSG)ExperimentalDataSnapshotMethod:&nbspX-RAYDIFFRACTIONResolution:&nbsp1.75ÅR-ValueFree:&nbsp0.237&nbspR-ValueWork:&nbsp0.179&nbspR-ValueObserved:&nbsp0.185&nbspwwPDBValidation&nbsp&nbsp3DReport&nbspFullReportThisisversion1.4oftheentry.Seecomplete&nbsphistory.&nbspLiteratureDownloadPrimaryCitation&nbsp&nbspDownloadMendeleyCrystalstructureofanHEPNdomainprotein(TM0613)fromThermotogamaritimaat1.75Aresolution.Erlandsen,H.,&nbspCanaves,J.M.,&nbspElsliger,M.A.,&nbspvonDelft,F.,&nbspBrinen,L.S.,&nbspDai,X.,&nbspDeacon,A.M.,&nbspFloyd,R.,&nbspGodzik,A.,&nbspGrittini,C.,&nbspGrzechnik,S.K.,&nbspJaroszewski,L.,&nbspKlock,H.E.,&nbspKoesema,E.,&nbspKovarik,J.S.,&nbspKreusch,A.,&nbspKuhn,P.,&nbspLesley,S.A.,&nbspMcMullan,D.,&nbspMcPhillips,T.M.,&nbspMiller,M.D.,&nbspMorse,A.,&nbspMoy,K.,&nbspOuyang,J.,&nbspPage,R.,&nbspRobb,A.,&nbspQuijano,K.,&nbspSchwarzenbacher,R.,&nbspSpraggon,G.,&nbspStevens,R.C.,&nbspvandenBedem,H.,&nbspVelasquez,J.,&nbspVincent,J.,&nbspWang,X.,&nbspWest,B.,&nbspWolf,G.,&nbspHodgson,K.O.,&nbspWooley,J.,&nbspWilson,I.A.(2004)Proteins&nbsp54:806-809PubMed:&nbsp14997578&nbspSearchonPubMedDOI:&nbsp10.1002/prot.10631PrimaryCitationofRelatedStructures:&nbsp1O3UMacromoleculesFindsimilarproteinsby: Sequence 100%95%90%80%70%60%50%40%30%(byidentitycutoff) | 3DStructureEntityID:1MoleculeChainsSequenceLengthOrganismDetailsImageconservedhypotheticalproteinTM0613A135ThermotogamaritimaMutation(s):1&nbspGeneNames:&nbspTM0613UniProtFindproteinsfor&nbspQ9WZ82&nbsp(Thermotogamaritima(strainATCC43589/DSM3109/JCM10099/NBRC100826/MSB8))Explore&nbspQ9WZ82&nbspGotoUniProtKB:&nbspQ9WZ82ProteinFeatureViewExpandReferenceSequenceSmallMoleculesModifiedResidues&nbsp1UniqueIDChainsTypeFormula2DDiagramParentMSEQueryonMSEAL-PEPTIDELINKINGC5H11NO2SeMETExperimentalData&ValidationExperimentalDataMethod:&nbspX-RAYDIFFRACTIONResolution:&nbsp1.75ÅR-ValueFree:&nbsp0.237&nbspR-ValueWork:&nbsp0.179&nbspR-ValueObserved:&nbsp0.185&nbspSpaceGroup:&nbspP41212DiffractionDataDOI:&nbsp10.18430/M31O3U&nbspProteinDiffractionUnitCell:Length(Å)Angle(˚)a=57.922α=90b=57.922β=90c=63.735γ=90SoftwarePackage:SoftwareNamePurposeMOSFLMdatareductionSCALAdatascalingRESOLVEmodelbuildingSOLVEphasingREFMACrefinementCCP4datascalingRESOLVEphasingStructureValidationView&nbspFullValidationReportViewmorein-depthexperimentaldataEntryHistory&nbspDepositionDataDepositedDate:&nbsp2003-03-28&nbspReleasedDate:&nbsp2003-04-22&nbspDepositionAuthor(s):&nbspJointCenterforStructuralGenomics(JCSG)RevisionHistory (Fulldetailsanddatafiles)Version1.0:2003-04-22Type:InitialreleaseVersion1.1:2008-04-26Changes:VersionformatcomplianceVersion1.2:2011-07-13Changes:Advisory,VersionformatcomplianceVersion1.3:2017-10-04Changes:RefinementdescriptionVersion1.4:2018-07-18Changes:Datacollection,DatabasereferencesAboutAboutUsCitingUsPublicationsTeamCareersUsage&PrivacyHelpContactUsDocumentationWebsiteFAQGlossaryServiceStatusRCSBPartnersNucleicAcidDatabasewwPDBPartnersRCSBPDBPDBePDBjBMRBEMDBRCSBPDB(citation)ishostedbyRCSBPDBisamemberoftheRCSBPDBisfundedby theNationalScienceFoundation(DBI-1832184), theUSDepartmentofEnergy(DE-SC0019749), andtheNationalCancerInstitute, NationalInstituteofAllergyandInfectiousDiseases, andNationalInstituteofGeneralMedicalSciencesoftheNationalInstitutesofHealthundergrantR01GM133198.